BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB003H01SP1|AL425189
(1003 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig153 1029 0.0
>3x_Contig153
Length = 1175
Score = 1029 bits (505), Expect = 0.0
Identities = 712/800 (89%), Gaps = 1/800 (0%)
Strand = Plus / Minus
Query: 205 aaaacgagaaacgtcaggccaatccgcakcaggaggagtkcckaacgcacggaaggggac 264
||||| |||||| ||||||||||||||| ||| |||||| || ||||||||||| | ||
Sbjct: 878 aaaactagaaacttcaggccaatccgcatcagtaggagttcctaacgcacggaatgttac 819
Query: 265 ggttatcggarcaacatcagcgggccccggcaaagaaggaaggcgcaacaggaagdckgc 324
| ||||| || |||||||| | |||||||||| |||||| | ||||| || | ||
Sbjct: 818 gtttatctgatcaacatcatctttccccggcaaataaggaattctcaacattaattctgc 759
Query: 325 gaadawaacaccgacagaccagatagcgaccgcagagggggagkgkttkgcaccaaagaa 384
||| | ||||||||||||||||||| |||||||||||| | || | || |||||||| ||
Sbjct: 758 gaatataacaccgacagaccagatatcgaccgcagaggtgtagtgttttgcaccaaataa 699
Query: 385 gagcgccggtgcgctgtaccatcggggaacaacggtacgggtcaaaatcgcctgggggga 444
|||| ||||||| |||||||||| || ||||||| ||| |||||||||| |||| || ||
Sbjct: 698 gagctccggtgctctgtaccatctggtaacaacgttactggtcaaaatctcctgtggtga 639
Query: 445 cgccaggagtctggcgagaccaaaagckgcgagkttcaatggaccatcaggggctaatag 504
||||| |||||||| ||||||||| | |||| |||||| |||||||||| ||||||||
Sbjct: 638 cgccattagtctggctagaccaaaatctgcgattttcaattgaccatcaggtgctaatag 579
Query: 505 taaatrakkgggcttcaaatctctatgaaggatgaagtgtctatgacaatggtggacacc 564
||||| | |||||||||||||||||||| ||||||| ||||||||||||||| |||||
Sbjct: 578 taaattatttggcttcaaatctctatgaagtatgaagtttctatgacaatggtgtacacc 519
Query: 565 tctcaaaggcattagaatccaggacntaagatcggcgggactgaacagaagagaagggtc 624
|||||||| |||||||||||||||| ||| ||| || |||||||||| || ||||| |||
Sbjct: 518 tctcaaagtcattagaatccaggacttaatatctgctggactgaacataatagaagtgtc 459
Query: 625 ctgaagaatgagctccaagtcggcaggkagaaactccaacactaaatkcaaattatcgtt 684
|| || ||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||
Sbjct: 458 cttaataatgatctccaagtcggcaggtagaaactccaacactaaattcaaattatcgtt 399
Query: 685 tgccatgaaaacgtctaytwwttcaataacattcacatgcttcaactcttgkagaaactt 744
||||||||||||||||| | |||||||||||||||||||||||||||||| ||||||||
Sbjct: 398 tgccatgaaaacgtctactaattcaataacattcacatgcttcaactcttgtagaaactt 339
Query: 745 cacttcayktaatgctgacatgtcaagtccatctttgaactgtgaggkcttgakctcctt 804
||||||| |||||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 338 cacttcacgtaatgctgacatgtcaagtccatctttgaactgtgaggtcttgatctcctt 279
Query: 805 caccgcaatactccttccagtggacttcttagttcccaaataaaccacggcatacgtacc 864
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 caccgcaatactccttccagtggacttcttagttcccaaataaaccacggcatacgtacc 219
Query: 865 ttcayyagyctttttctccttagtatagkcatcaacagtagatttaagggtcatggttta 924
|||| || ||||||||||||||||||| |||||||||||||||| ||||||||||||||
Sbjct: 218 ttcaccagcctttttctccttagtatagtcatcaacagtagattttagggtcatggttta 159
Query: 925 taactkcgagctctaccgtatgacagaatcagttcccagatccaacgatgactttaaaca 984
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 158 taacttcgagctctaccgtatgacagaatcagttcccagatccaacgatgactttaaaca 99
Query: 985 t-maatgtctatctgcatgt 1003
| |||||||||||||||||
Sbjct: 98 tcaaatgtctatctgcatgt 79
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.41 0.716 1.34
Gapped
Lambda K H
1.41 0.716 1.34
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3091
Number of Sequences: 1807
Number of extensions: 3091
Number of successful extensions: 55
Number of sequences better than 1.0e-20: 1
length of query: 1003
length of database: 10,358,551
effective HSP length: 16
effective length of query: 987
effective length of database: 10,329,639
effective search space: 10195353693
effective search space used: 10195353693
T: 0
A: 40
X1: 5 (10.2 bits)
X2: 14 (28.5 bits)
S1: 12 (24.9 bits)
S2: 49 (100.4 bits)